- Evo_source
- “Evo_source” column indicates that whether this record is a known precursor miRNA (pre-mir) from miRBase 13.0, an orthologous pre-mir highly similar to pre-mirs from other species or a paralogous pre-mir highly similar to pre-mirs from own species.
- Species_No
- In “Species_No” column, the value “a/b” indicates that a out of 86 (22+34+30) species are known to encode this pre-mir class and b out of 86 species are known or predicted to encode this pre-miR class.
- Distribution
- In “Distribution” column, the value “c/d” indicates that c pre-mirs in this own species belong to this pre-mir class and that d pre-mirs in all 86 (22+34+30) species belong to this pre-mir class.
Index | ID | Class | Mature miRNA (MatMiR) |
Match/ MatMiR Length |
Chrom | Strand | MatMiR Position |
PreMir Position |
Confidence | Evo_ Source |
Species_ No |
Distribution |
---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | cbr-mir-239a | mir-239 | cbr-miR-239a | 23/23 | cb25.fpc0003 | + | 29-51 | N/A | - | miRBase_13_0 | 2/5 | 3/8 |
2 | cbr-mir-239b | mir-239 | cbr-miR-239b | 21/21 | cb25.fpc0003 | - | 20-40 | N/A | - | miRBase_13_0 | 2/5 | 3/8 |
3 | cbr-mir-62 | mir-62 | cbr-miR-62 | 22/22 | cb25.fpc0003 | - | 61-82 | N/A | - | miRBase_13_0 | 2/5 | 2/6 |
4 | cbr-mir-85 | mir-85 | cbr-miR-85 | 24/24 | cb25.fpc0011 | + | 50-73 | N/A | - | miRBase_13_0 | 2/3 | 2/4 |
5 | cbr-mir-234 | mir-234 | cbr-miR-234 | 21/21 | cb25.fpc0022 | - | 59-79 | N/A | - | miRBase_13_0 | 2/3 | 2/4 |
6 | cbr-mir-358 | mir-358 | cbr-miR-358 | 22/22 | cb25.fpc0024 | + | 63-84 | N/A | - | miRBase_13_0 | 2/3 | 1/3 |
7 | cbr-mir-34 | mir-34 | cbr-miR-34 | 22/22 | cb25.fpc0045 | + | 18-39 | N/A | - | miRBase_13_0 | 45/67 | 3/144 |
8 | cbr-mir-82 | mir-82 | cbr-miR-82 | 22/22 | cb25.fpc0045 | + | 59-80 | N/A | - | miRBase_13_0 | 2/5 | 2/7 |
9 | cbr-mir-248 | mir-248 | cbr-miR-248 | 23/23 | cb25.fpc0045 | + | 61-83 | N/A | - | miRBase_13_0 | 2/2 | 1/2 |
10 | cbr-mir-74 | mir-74 | cbr-miR-74 | 22/22 | cb25.fpc0045 | - | 54-75 | N/A | - | miRBase_13_0 | 2/5 | 2/7 |
11 | cbr-mir-73 | mir-73 | cbr-miR-73 | 23/23 | cb25.fpc0045 | - | 56-78 | N/A | - | miRBase_13_0 | 2/4 | 1/4 |
12 | cbr-mir-75 | mir-75 | cbr-miR-75 | 22/22 | cb25.fpc0045 | - | 57-78 | N/A | - | miRBase_13_0 | 2/5 | 1/5 |
13 | cbr-mir-81 | mir-81 | cbr-miR-81 | 22/22 | cb25.fpc0045 | - | 57-78 | N/A | - | miRBase_13_0 | 2/2 | 1/2 |
14 | cbr-mir-49 | mir-49 | cbr-miR-49 | 22/22 | cb25.fpc0045 | - | 61-82 | N/A | - | miRBase_13_0 | 2/3 | 1/3 |
15 | cbr-mir-57 | mir-57 | cbr-miR-57 | 24/24 | cb25.fpc0058 | + | 15-38 | N/A | - | miRBase_13_0 | 2/4 | 1/4 |
16 | cbr-mir-252 | mir-252 | cbr-miR-252 | 23/23 | cb25.fpc0058 | + | 17-39 | N/A | - | miRBase_13_0 | 10/22 | 2/31 |
17 | cbr-lin-4 | lin-4 | cbr-lin-4 | 21/21 | cb25.fpc0058 | + | 21-41 | N/A | - | miRBase_13_0 | 3/5 | 1/5 |
18 | cbr-mir-355 | mir-355 | cbr-miR-355 | 21/21 | cb25.fpc0058 | + | 33-53 | N/A | - | miRBase_13_0 | 2/8 | 1/9 |
19 | cbr-mir-45-1 | mir-45 | cbr-miR-45 | 21/21 | cb25.fpc0058 | + | 55-75 | N/A | - | miRBase_13_0 | 2/2 | 2/3 |
20 | cbr-mir-43 | mir-43 | cbr-miR-43 | 23/23 | cb25.fpc0058 | + | 57-79 | N/A | - | miRBase_13_0 | 2/2 | 1/2 |
21 | cbr-mir-42 | mir-42 | cbr-miR-42 | 20/20 | cb25.fpc0058 | + | 61-80 | N/A | - | miRBase_13_0 | 2/2 | 2/3 |
22 | cbr-mir-44 | mir-44 | cbr-miR-44 | 21/21 | cb25.fpc0058 | + | 61-81 | N/A | - | miRBase_13_0 | 2/5 | 3/11 |
23 | cbr-mir-60 | mir-60 | cbr-miR-60 | 23/23 | cb25.fpc0058 | - | 46-68 | N/A | - | miRBase_13_0 | 2/4 | 2/5 |
24 | cbr-mir-45-2 | mir-45 | cbr-miR-45 | 21/21 | cb25.fpc0058 | - | 55-75 | N/A | - | miRBase_13_0 | 2/2 | 2/3 |
25 | cbr-mir-35 | mir-35 | cbr-miR-35 | 22/22 | cb25.fpc0058 | - | 59-80 | N/A | - | miRBase_13_0 | 2/3 | 3/5 |
26 | cbr-mir-36 | mir-36 | cbr-miR-36 | 22/22 | cb25.fpc0058 | - | 64-85 | N/A | - | miRBase_13_0 | 3/4 | 3/6 |
27 | cbr-mir-39 | mir-39 | cbr-miR-39 | 22/22 | cb25.fpc0058 | - | 65-86 | N/A | - | miRBase_13_0 | 2/2 | 1/2 |
28 | cbr-mir-41 | mir-41 | cbr-miR-41 | 21/21 | cb25.fpc0058 | - | 68-88 | N/A | - | miRBase_13_0 | 2/4 | 1/4 |
29 | cbr-mir-38 | mir-38 | cbr-miR-38 | 22/22 | cb25.fpc0058 | - | 70-91 | N/A | - | miRBase_13_0 | 2/3 | 1/3 |
30 | cbr-mir-40 | mir-40 | cbr-miR-40 | 22/22 | cb25.fpc0058 | - | 71-92 | N/A | - | miRBase_13_0 | 2/3 | 1/3 |
31 | cbr-mir-58 | mir-58 | cbr-miR-58 | 22/22 | cb25.fpc0063 | - | 59-80 | N/A | - | miRBase_13_0 | 2/4 | 1/5 |
32 | cbr-mir-241 | mir-241 | cbr-miR-241 | 21/21 | cb25.fpc0090 | + | 14-34 | N/A | - | miRBase_13_0 | 2/9 | 2/11 |
33 | cbr-mir-48 | mir-48 | cbr-miR-48 | 23/23 | cb25.fpc0090 | + | 18-40 | N/A | - | miRBase_13_0 | 2/3 | 2/5 |
34 | cbr-mir-55 | mir-55 | cbr-miR-55 | 23/23 | cb25.fpc0106 | - | 68-90 | N/A | - | miRBase_13_0 | 2/4 | 2/5 |
35 | cbr-mir-124 | mir-124 | cbr-miR-124 | 21/21 | cb25.fpc0143 | + | 61-81 | N/A | - | miRBase_13_0 | 47/65 | 1/135 |
36 | cbr-mir-246 | mir-246 | cbr-miR-246 | 22/22 | cb25.fpc0143 | + | 65-86 | N/A | - | miRBase_13_0 | 2/4 | 1/4 |
37 | cbr-mir-52 | mir-52 | cbr-miR-52 | 24/24 | cb25.fpc0143 | - | 19-42 | N/A | - | miRBase_13_0 | 2/2 | 1/2 |
38 | cbr-mir-51 | mir-51 | cbr-miR-51 | 23/23 | cb25.fpc0143 | - | 44-66 | N/A | - | miRBase_13_0 | 2/4 | 2/5 |
39 | cbr-mir-232 | mir-232 | cbr-miR-232 | 23/23 | cb25.fpc0143 | - | 57-79 | N/A | - | miRBase_13_0 | 2/3 | 3/6 |
40 | cbr-let-7 | let-7 | cbr-let-7 | 22/22 | cb25.fpc0829 | - | 13-34 | N/A | - | miRBase_13_0 | 44/65 | 2/337 |
41 | cbr-mir-47 | mir-47 | cbr-miR-47 | 22/22 | cb25.fpc0829 | - | 57-78 | N/A | - | miRBase_13_0 | 2/5 | 2/10 |
42 | cbr-mir-392 | mir-392 | cbr-miR-392 | 22/22 | cb25.fpc0829 | - | 58-79 | N/A | - | miRBase_13_0 | 2/3 | 2/4 |
43 | cbr-mir-245 | mir-245 | cbr-miR-245 | 22/22 | cb25.fpc1417 | - | 53-74 | N/A | - | miRBase_13_0 | 2/3 | 2/4 |
44 | cbr-mir-354 | mir-354 | cbr-miR-354 | 21/21 | cb25.fpc2090 | - | 80-100 | N/A | - | miRBase_13_0 | 2/3 | 1/3 |
45 | cbr-mir-67 | mir-67 | cbr-miR-67 | 24/24 | cb25.fpc2187 | - | 59-82 | N/A | - | miRBase_13_0 | 5/5 | 1/5 |
46 | cbr-mir-231 | mir-231 | cbr-miR-231 | 24/24 | cb25.fpc2193 | + | 56-79 | N/A | - | miRBase_13_0 | 2/2 | 2/3 |
47 | cbr-mir-253 | mir-253 | cbr-miR-253 | 21/21 | cb25.fpc2220 | + | 29-49 | N/A | - | miRBase_13_0 | 2/6 | 2/8 |
48 | cbr-lsy-6 | lsy-6 | cbr-lsy-6 | 21/21 | cb25.fpc2220 | + | 50-70 | N/A | - | miRBase_13_0 | 2/3 | 2/4 |
49 | cbr-mir-259 | mir-259 | cbr-miR-259 | 21/21 | cb25.fpc2220 | - | 17-37 | N/A | - | miRBase_13_0 | 2/3 | 1/3 |
50 | cbr-mir-255 | mir-255 | cbr-miR-255 | 22/22 | cb25.fpc2220 | - | 57-78 | N/A | - | miRBase_13_0 | 2/3 | 2/4 |
51 | cbr-mir-77 | mir-77 | cbr-miR-77 | 22/22 | cb25.fpc2260 | + | 61-82 | N/A | - | miRBase_13_0 | 2/5 | 3/8 |
52 | cbr-mir-789b | mir-789 | cbr-miR-789b | 23/23 | cb25.fpc2310 | - | 58-80 | N/A | - | miRBase_13_0 | 2/5 | 3/11 |
53 | cbr-mir-236 | mir-236 | cbr-miR-236 | 23/23 | cb25.fpc2454 | - | 61-83 | N/A | - | miRBase_13_0 | 2/3 | 1/3 |
54 | cbr-mir-356 | mir-356 | cbr-miR-356 | 21/21 | cb25.fpc2887 | - | 20-40 | N/A | - | miRBase_13_0 | 2/2 | 2/3 |
55 | cbr-mir-1 | mir-1 | cbr-miR-1 | 21/21 | cb25.fpc2888 | - | 56-76 | N/A | - | miRBase_13_0 | 41/61 | 3/166 |
56 | cbr-mir-235 | mir-235 | cbr-miR-235 | 22/22 | cb25.fpc2888 | - | 56-77 | N/A | - | miRBase_13_0 | 2/3 | 1/3 |
57 | cbr-mir-86 | mir-86 | cbr-miR-86 | 23/23 | cb25.fpc2976 | - | 16-38 | N/A | - | miRBase_13_0 | 2/4 | 2/5 |
58 | cbr-mir-791 | mir-791 | cbr-miR-791 | 23/23 | cb25.fpc3857 | + | 53-75 | N/A | - | miRBase_13_0 | 2/3 | 1/3 |
59 | cbr-mir-359 | mir-359 | cbr-miR-359 | 22/22 | cb25.fpc3857 | + | 55-76 | N/A | - | miRBase_13_0 | 2/2 | 1/2 |
60 | cbr-mir-230 | mir-230 | cbr-miR-230 | 23/23 | cb25.fpc3857 | + | 59-81 | N/A | - | miRBase_13_0 | 2/5 | 2/6 |
61 | cbr-mir-360 | mir-360 | cbr-miR-360 | 21/21 | cb25.fpc3857 | + | 63-83 | N/A | - | miRBase_13_0 | 2/2 | 1/2 |
62 | cbr-mir-785 | mir-785 | cbr-miR-785 | 21/21 | cb25.fpc3857 | + | 67-87 | N/A | - | miRBase_13_0 | 2/5 | 2/6 |
63 | cbr-mir-249 | mir-249 | cbr-miR-249 | 22/22 | cb25.fpc3857 | - | 75-96 | N/A | - | miRBase_13_0 | 2/6 | 2/7 |
64 | cbr-mir-90 | mir-90 | cbr-miR-90 | 22/22 | cb25.fpc4013 | + | 58-79 | N/A | - | miRBase_13_0 | 2/3 | 1/3 |
65 | cbr-mir-80 | mir-80 | cbr-miR-80 | 23/23 | cb25.fpc4013 | - | 61-83 | N/A | - | miRBase_13_0 | 2/2 | 2/3 |
66 | cbr-mir-64 | mir-64 | cbr-miR-64 | 23/23 | cb25.fpc4030 | - | 25-47 | N/A | - | miRBase_13_0 | 2/2 | 1/2 |
67 | cbr-mir-84 | mir-84 | cbr-miR-84 | 22/22 | cb25.fpc4033 | + | 39-60 | N/A | - | miRBase_13_0 | 2/3 | 2/4 |
68 | cbr-mir-233 | mir-233 | cbr-miR-233 | 23/23 | cb25.fpc4033 | - | 60-82 | N/A | - | miRBase_13_0 | 2/2 | 1/2 |
69 | cbr-mir-786 | mir-786 | cbr-miR-786 | 23/23 | cb25.fpc4044 | + | 55-77 | N/A | - | miRBase_13_0 | 2/2 | 2/3 |
70 | cbr-mir-240 | mir-240 | cbr-miR-240 | 22/22 | cb25.fpc4044 | + | 72-93 | N/A | - | miRBase_13_0 | 2/2 | 2/3 |
71 | cbr-mir-784 | mir-784 | cbr-miR-784 | 22/22 | cb25.fpc4044 | - | 9-30 | N/A | - | miRBase_13_0 | 2/3 | 2/4 |
72 | cbr-mir-254 | mir-254 | cbr-miR-254 | 23/23 | cb25.fpc4069 | + | 63-85 | N/A | - | miRBase_13_0 | 2/2 | 2/3 |
73 | cbr-mir-83 | mir-83 | cbr-miR-83 | 22/22 | cb25.fpc4069 | + | 66-87 | N/A | - | miRBase_13_0 | 2/4 | 1/4 |
74 | cbr-mir-251 | mir-251 | cbr-miR-251 | 24/24 | cb25.fpc4069 | - | 17-40 | N/A | - | miRBase_13_0 | 2/5 | 2/6 |
75 | cbr-mir-787 | mir-787 | cbr-miR-787 | 23/23 | cb25.fpc4069 | - | 56-78 | N/A | - | miRBase_13_0 | 2/2 | 1/2 |
76 | cbr-mir-46 | mir-46 | cbr-miR-46 | 22/22 | cb25.fpc4079 | + | 58-79 | N/A | - | miRBase_13_0 | 2/2 | 1/2 |
77 | cbr-mir-357 | mir-357 | cbr-miR-357 | 21/21 | cb25.fpc4079 | + | 67-87 | N/A | - | miRBase_13_0 | 2/3 | 1/4 |
78 | cbr-mir-789a | mir-789 | cbr-miR-789a | 23/23 | cb25.fpc4126 | + | 66-88 | N/A | - | miRBase_13_0 | 2/5 | 3/11 |
79 | cbr-mir-70 | mir-70 | cbr-miR-70 | 23/23 | cb25.fpc4126 | - | 58-80 | N/A | - | miRBase_13_0 | 2/3 | 1/3 |
80 | cbr-mir-790-2 | mir-790 | cbr-miR-790 | 22/22 | cb25.fpc4152 | - | 6-27 | N/A | - | miRBase_13_0 | 2/2 | 2/3 |
81 | cbr-mir-790-1 | mir-790 | cbr-miR-790 | 22/22 | cb25.fpc4152 | - | 17-38 | N/A | - | miRBase_13_0 | 2/2 | 2/3 |
82 | cbr-mir-228 | mir-228 | cbr-miR-228 | 23/23 | cb25.fpc4152 | - | 17-39 | N/A | - | miRBase_13_0 | 2/4 | 2/6 |
83 | cbr-mir-792 | mir-792 | cbr-miR-792 | 23/23 | cb25.fpc4180 | + | 61-83 | N/A | - | miRBase_13_0 | 2/2 | 1/2 |
84 | cbr-mir-72 | mir-72 | cbr-miR-72 | 19/19 | cb25.fpc4247 | - | 17-35 | N/A | - | miRBase_13_0 | 2/3 | 2/4 |
85 | cbr-mir-242 | mir-242 | cbr-miR-242 | 21/21 | cb25.fpc4248 | - | 28-48 | N/A | - | miRBase_13_0 | 7/7 | 1/10 |
86 | cbr-mir-50 | mir-50 | cbr-miR-50 | 24/24 | cb25.fpc4321 | + | 18-41 | N/A | - | miRBase_13_0 | 2/4 | 2/5 |
87 | cbr-mir-244 | mir-244 | cbr-miR-244 | 24/24 | cb25.fpc4321 | + | 18-41 | N/A | - | miRBase_13_0 | 2/5 | 2/6 |
88 | cbr-mir-79 | mir-79 | cbr-miR-79 | 22/22 | cb25.fpc4321 | + | 57-78 | N/A | - | miRBase_13_0 | 22/28 | 2/45 |
89 | cbr-mir-71 | mir-71 | cbr-miR-71 | 19/19 | cb25.fpc4321 | - | 11-29 | N/A | - | miRBase_13_0 | 13/17 | 2/25 |
90 | cbr-mir-353 | mir-353 | cbr-miR-353 | 21/21 | cb25.fpc4321 | - | 30-50 | N/A | - | miRBase_13_0 | 2/2 | 1/2 |
91 | cbr-mir-788 | mir-788 | cbr-miR-788 | 26/26 | cb25.fpc4403 | - | 10-35 | N/A | - | miRBase_13_0 | 2/3 | 2/4 |
92 | cbr-mir-268 | mir-268 | cbr-miR-268 | 25/25 | cb25.fpc4470 | + | 7-31 | N/A | - | miRBase_13_0 | 2/2 | 1/2 |
93 | cbr-mir-250 | mir-250 | cbr-miR-250 | 22/22 | cb25.fpc4470 | + | 56-77 | N/A | - | miRBase_13_0 | 2/3 | 1/3 |
94 | cbr-mir-61 | mir-61 | cbr-miR-61 | 23/23 | cb25.fpc4470 | + | 58-80 | N/A | - | miRBase_13_0 | 3/5 | 2/7 |
95 | cbr-mir-87 | mir-87 | cbr-miR-87 | 20/20 | cb25.fpc4470 | - | 61-80 | N/A | - | miRBase_13_0 | 21/27 | 2/39 |
Total | 95 record(s). |